食品科学 ›› 2022, Vol. 43 ›› Issue (16): 186-193.doi: 10.7506/spkx1002-6630-20210909-113

• 生物工程 • 上一篇    下一篇

橄榄苦苷改善db/db小鼠糖尿病的肝脏转录组学及生物信息学分析

郑淑娟,谢子鑫,方靖靖,王亚楠,耿睿璇,赵雨菡,李梦杰,仝涛,黄昆仑   

  1. (1.中国农业大学食品科学与营养工程学院,精准营养与食品质量重点实验室,教育部功能乳品重点实验室,北京 100083;2.农业农村部转基因生物安全评价重点实验室(食品安全),食品质量与安全北京实验室,北京 100083)
  • 出版日期:2022-08-25 发布日期:2022-08-31
  • 基金资助:
    “十三五”国家重点研发计划重点专项(2017YFC1600901);中国农业大学2115人才工程资助项目

Hepatic Transcriptomics and Bioinformatics Analysis Reveals that Oleuropein Alleviates Diabetes in db/db Mice

ZHENG Shujuan, XIE Zixin, FANG Jingjing, WANG Yanan, GENG Ruixuan, ZHAO Yuhan, LI Mengjie, TONG Tao, HUANG Kunlun   

  1. (1. Key Laboratory of Precision Nutrition and Food Quality, Key Laboratory of Functional Dairy, Ministry of Education, College of Food Science and Nutritional Engineering, China Agricultural University, Beijing 100083, China; 2. Key Laboratory of Safety Assessment of Genetically Modified Organism (Food Safety), Ministry of Agriculture and Rural Affairs, Beijing Laboratory for Food Quality and Safety, Beijing 100083, China)
  • Online:2022-08-25 Published:2022-08-31

摘要: 通过转录组学及其生物信息学分析,研究了橄榄苦苷缓解db/db小鼠糖尿病的肝脏差异表达基因及相关信号通路。结果发现与db/db对照组相比,橄榄苦苷处理组的539 个基因发生显著变化,其中450 个基因显著上调,89 个基因显著下调。将上调和下调的差异表达基因在基因本体论数据库中注释,这些差异表达基因主要在细胞过程、细胞部分和结合中分布。京都基因与基因组百科全书通路富集分析结果显示上调的差异表达基因主要富集在磷酸肌醇3-激酶-蛋白激酶B信号通路途径,该通路共涉及27 个差异表达基因;下调的差异表达基因主要富集在花生四烯酸代谢和真核生物中核糖体的生物发生信号通路途径,分别涉及4 个差异表达基因。本研究为进一步阐明橄榄苦苷缓解2型糖尿病的分子机制奠定了基础。

关键词: 橄榄苦苷;转录组;差异表达基因;功能注释;磷酸肌醇3-激酶-蛋白激酶B信号通路

Abstract: Transcriptomic and bioinformatic analyses were performed to investigate the differentially expressed genes and signaling pathways in the liver related to the role of oleuropein in alleviating type 2 diabetes in db/db mice. The results showed that compared with the db/db control group, 539 genes in the oleuropein treatment group had significant changes, of which 450 genes were significantly up-regulated and 89 genes were down-regulated. The up-regulated and down-regulated differentially expressed genes were annotated in the Gene Ontology database, revealing that they were mainly distributed in cellular processes, cell parts, and binding terms. The results of Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis showed that the up-regulated differentially expressed genes were mainly enriched in the phosphoinositide 3-kinase-protein kinase-B signaling pathway, which involved a total of 27 differentially expressed genes; the down-regulated differentially expressed genes were mainly enriched in arachidonic acid metabolism and ribosomal biogenesis signaling pathways in eukaryotes, which involved four differentially expressed genes, separately. This study lays the foundation for further elucidating the molecular mechanism by which oleuropein alleviates type 2 diabetes.

Key words: oleuropein; transcriptome; differentially expressed genes; functional annotation; PI3K-Akt signaling pathway

中图分类号: