食品科学 ›› 2025, Vol. 46 ›› Issue (11): 384-396.doi: 10.7506/spkx1002-6630-20241126-174

• 专题论述 • 上一篇    

人工智能算法在抗菌肽预测领域的应用

钱宇辰,聂挺,花彦铭,徐诗莹,郭盛,张鑫,罗小虎,刘亚楠   

  1. (1.宁波大学食品科学与工程学院,浙江-马来西亚农产品加工与营养健康联合实验室,全省食品微生物与营养健康重点实验室,浙江 宁波 315832;2.上海交通大学生命科学技术学院,微生物代谢国家重点实验室,代谢与发育科学国际合作联合实验室,上海 200240;3.宁波市产品食品质量检验研究院(宁波市纤维检验所),中国商业联合会食品重点危害物质检测与风险防范重点实验室,宁波市食品重点危害物质检测、控制与预警重点实验室,浙江 宁波 315048;4.南京农业大学食品科技学院,江苏 南京 210095)
  • 发布日期:2025-05-14

Application of Artificial Intelligence Algorithms in the Field of Antimicrobial Peptide Prediction

QIAN Yuchen, NIE Ting, HUA Yanming, XU Shiying, GUO Sheng, ZHANG Xin, LUO Xiaohu, LIU Yanan   

  1. (1. Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Provincial Key Laboratory of Food Microbiology and Nutritional Health, College of Food Science and Engineering, Ningbo University, Ningbo 315832, China; 2. State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China;3. Key Laboratory of Detection and Risk Prevention of Key Hazardous Materials in Food, China General Chamber of Commerce, Ningbo Key Laboratory of Detection, Control, and Early Warning of Key Hazardous Materials in Food, Ningbo Academy of Product and Food Quality Inspection (Ningbo Fibre Inspection Institute), Ningbo 315048, China;4. College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095, China)
  • Published:2025-05-14

摘要: 抗菌肽作为具有广泛抗菌活性的小分子肽,因其独特抑菌机制在食品保鲜等领域展现出巨大潜力。然而,传统筛选方法耗时费力、资源消耗大,且所得抗菌肽常存在稳定性差、细胞毒性高等问题,限制了其广泛应用。近年来,人工智能技术的快速发展为抗菌肽研究带来了新机遇。人工智能算法能够基于先验知识与实时数据持续优化,显著提高了抗菌肽的预测效率,降低了研发成本。同时,这些算法还为探索抗菌肽的多样性、优化其性能提供了可能。目前,多个专业数据库已建立,为算法模型训练提供了丰富资源。此外,基因组学、转录组学、蛋白质组学等多源生物信息数据也被广泛用于抗菌肽预测,以期更精准地识别具有潜在抗菌活性的肽段。本文综述当前各类人工智能算法模型预测抗菌肽的原理及适用情况,并探讨针对抗菌肽应用困境而设计的特定预测模型。旨在启发读者如何选择和设计人工智能算法,推动其在食品安全与人类健康领域的创新应用。

关键词: 人工智能算法;机器学习;深度学习;抗菌肽

Abstract: Antimicrobial peptides, as small molecular peptides with extensive antibacterial activity, have shown great potential in food preservation and other fields because of their unique antibacterial mechanism. However, traditional screening methods are time-consuming and resource-consuming, and often yield antimicrobial peptides with poor stability and high cytotoxicity, limiting their wide application. In recent years, the rapid development of artificial intelligence technology has brought new opportunities for research on antimicrobial peptides. Artificial intelligence algorithms can be continuously optimized based on prior knowledge and real-time data, which significantly improves the prediction efficiency of antibacterial peptides and reduces research and development costs. Additionally, these algorithms offer the possibility to explore the diversity of antimicrobial peptides and optimize their properties. Currently, several specialized databases have been established, providing rich resources for algorithmic model training. Furthermore, multi-source bioinformatics data such as genomics, transcriptomics and proteomics are also widely used to predict antimicrobial peptides, with a view to identifying peptides with potential antimicrobial activity more accurately. This article reviews the principles and applicability of various current artificial intelligence algorithmic models for predicting antimicrobial peptides, and explores prediction models specifically designed to address the dilemma facing the application of antimicrobial peptides. It aims to guide readers in selecting and designing artificial intelligence algorithms and to promote their innovative applications in the fields of food safety and human health.

Key words: artificial intelligence algorithm; machine learning; deep learning; antimicrobial peptides

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