食品科学 ›› 2025, Vol. 46 ›› Issue (16): 63-66.doi: 10.7506/spkx1002-6630-20241205-042

• 基础研究 • 上一篇    

基于网络药理学、分子对接和实验验证探讨藤茶黄酮类化合物抑菌的效果和机制

张丽慧,王丹丹,孟艳林,王美会,朱小勇,闫志强,何莉,黄卫,王巧燕   

  1. (1.铜仁职业技术学院药学院,贵州?铜仁 554300;2.重庆市畜牧科学院,重庆 402460;3.贵州苗药生物技术有限公司,贵州?铜仁 554400)
  • 发布日期:2025-07-22
  • 基金资助:
    铜仁市科技局2022年度市级科技计划项目(铜市科研〔2022〕79号); 贵州省高等学校中药现代提取分离纯化关键技术开发与应用创新团队项目(黔教技[2023]097号); 铜仁市2024年省级少数民族教育专项(铜财农专款〔2024〕114号)

Exploring Antibacterial Effect and Mechanism of Flavonoids in Ampelopsis Based on Network Pharmacology, Molecular Docking and Experimental Verification

ZHANG Lihui, WANG Dandan, MENG Yanlin, WANG Meihui, ZHU Xiaoyong, YAN Zhiqiang, HE Li, HUANG Wei, WANG Qiaoyan   

  1. (1. School of Pharmaceutical Sciences, Tongren Polytechnic College, Tongren 554300, China; 2. Chongqing Academy of Animal Sciences, Chongqing 402460, China; 3. Guizhou Miaoyao Biotech Co., Ltd., Tongren 554400, China)
  • Published:2025-07-22

摘要: 为研究藤茶黄酮类化合物的抑菌效果及机制,使用网络药理学方法筛选藤茶黄酮类化合物抑菌的关键成分和核心靶点,通过基因本体论和京都基因与基因组百科全书通路富集筛选分析关键信号通路,并对核心靶点和关键成分进行分子对接;此外,以代表性成分二氢杨梅素进行体外的抑菌研究。网络药理学分析结果表明:藤茶黄酮类化合物抑菌的关键成分有7 个(二氢杨梅素、杨梅素、山柰酚等),核心靶点有5 个(前列腺素内过氧化物合酶2(prostaglandin-endoperoxide synthase 2,PTGS2)、肿瘤坏死因子(tumor necrosis factor,TNF)、丝氨酸/苏氨酸激酶1等),关键信号通路有23 条(TNF信号通路和C型凝集素受体信号通路等),同时关键成分和核心靶点间有较强的结合力。体外抑菌实验结果表明:二氢杨梅素对沙门氏菌3和沙门氏菌5的抑菌效果较为明显,其最小抑菌浓度和最小杀菌浓度分别为5 mg/mL和10 mg/mL,且可造成细菌质壁分离、细胞壁和细胞膜变化等,破坏细菌形态。综上,藤茶黄酮类化合物可能通过二氢杨梅素等成分作用于PTGS2等靶点,进而调控TNF等信号通路,通过机体或直接破坏细菌形态,进而发挥抑菌作用。

关键词: 网络药理学;分子对接;藤茶黄酮类化合物;抑菌效果

Abstract: To investigate the antibacterial effect and mechanism of flavonoids in Ampelopsis, network pharmacology was used to select key antibacterial flavonoid components in Ampelopsis and core targets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were carried out to identify key signaling pathways, and molecular docking was performed to predict the interactions between key antibacterial flavonoids and core targets. The in vitro antibacterial activity of dihydromyricetin as a representative flavonoid was tested. Network pharmacology identified seven key components including dihydromyricetin, myricetin and kaempferol, five core targets such as prostaglandin-endoperoxide synthase 2 (PTGS2), tumor necrosis factor (TNF) and serine/threonine-protein kinase 1 (AKT1), and 23 key signaling pathways including the TNF signaling pathway and the C-type lectin receptor signaling pathway. Additionally, strong binding affinity between key components and core targets was observed. Dihydromyricetin exhibited a significant antibacterial effect on two strains of Salmonella, with minimal inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) of 5 and 10 mg/mL, respectively. This flavonoid caused bacterial plasmolysis and alterations in the cell wall and membrane, and disrupted bacterial morphology. Therefore, flavonoids from Ampelopsis may regulate signaling pathways such as the TNF signaling pathway by acting on targets such as PTGS2 and disrupt bacterial morphology either directly or by influencing the bacterial environment, thereby exerting antibacterial effects.

Key words: network pharmacology; molecular docking; flavonoids from Ampelopsis; antibacterial effect

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