食品科学 ›› 2021, Vol. 42 ›› Issue (24): 92-99.doi: 10.7506/spkx1002-6630-20201014-122

• 生物工程 • 上一篇    

基于高通量测序分析储藏稻谷中的真菌群落结构与优势菌属

徐圆程,刘慧,王光宇,吴红影,邱伟芬   

  1. (南京财经大学食品科学与工程学院,江苏省现代粮食流通与安全协同创新中心,江苏省粮油品质控制及深加工技术重点实验室,江苏 南京 210023)
  • 发布日期:2021-12-30
  • 基金资助:
    “十三五”国家重点研发计划重点专项(2016YFD0401003);江苏省农业科技自主创新基金项目(CX(19)2005)

High-throughput Sequencing to Analyze the Fungal Community Structure and Dominant Fungal Genera in Stored Rice

XU Yuancheng, LIU Hui, WANG Guangyu, WU Hongying, QIU Weifen   

  1. (Key Laboratory of Grains and Oils Control and Processing of Jiangsu Province, Collaborative Innovation Center for Modern Grain Circulation and Safety, College of Food Science and Engineering, Nanjing University of Finance and Economics, Nanjing 210023, China)
  • Published:2021-12-30

摘要: 目的:探究不同环境条件下储藏稻谷中真菌多样性与真菌群落结构的变化。方法:以湖南衡阳仓储稻谷为研究对象,在不同温度(10、20、25、30、40?℃)和环境相对湿度(43%、75%和85%)条件下进行模拟储藏,然后利用Illumina HiSeq高通量测序技术分析原始稻谷与不同储藏条件下稻谷中真菌菌群结构与优势菌属。结果:基于可操作分类单元的物种分类分析,原始稻谷及在不同温度、湿度条件储藏后稻谷中的真菌群落共计属于6?个门、24?个纲、67?个目、160 个科、285?个属、406?个种。从门水平看,原始稻谷与储藏后的稻谷中子囊菌门(Ascomycetes)为优势菌门,相对丰度为2.53%~96.86%;其次为担子菌门(Basidiomycetes),相对丰度为0.02%~9.39%。从属水平上看,稻谷中的优势菌属有白僵菌属(Beauveria)、Ophiosphaerella、曲霉属(Aspergillus)、赤霉属(Gibberella)、链格孢属(Alternaria)、暗球腔菌属(Phaeosphaeria)、黑孢属(Nigrospora)、微座孢属(Microdochium)和假丝酵母属(Candida)。从种水平上看,优势的菌种为球孢白僵菌(B. bassiana)、O. agrostidis、黄曲霉(A. flavus)、黑曲霉(A. niger)、赭曲霉(A. ochraceus)、错综赤霉(G. intricans)、链格孢霉(A. longissimi)、小孢暗球腔菌(P. microscopica)、黑孢霉(N. oryzae)。通过Venn分析与主成分分析,发现原始稻谷样品与不同温、湿度条件下储藏后的稻谷样品中真菌群落多样性存在较大差异,不同温、湿度条件中的稻谷样品真菌群落多样性之间也存在差异。结论:相对湿度是影响A. flavus相对丰度的最重要因素,当相对湿度为85%时,A. flavus相对丰度在各储藏条件中达到最大。综上所述,本研究对仓储稻谷的安全储存条件的优化提供了理论支撑。

关键词: 高通量测序;稻谷;模拟储藏;菌群结构;优势真菌属

Abstract: Objective: To explore the fungal diversity and the change in the fungal community structure in stored rice under different environmental conditions. Methods: The fungal community structure and dominant genera in fresh rice and rice stored at different temperatures (10, 20, 25, 30 and 40 ℃) and relative humidities (43%, 75% and 85%) in Hengyang, Hunan were analyzed by Illumina HiSeq high throughput sequencing. Results: According to the species classification analysis based on operational taxonomic units (OTU), the fungal communities in all samples included 6 phylum, 24 classes, 67 orders, 160 families, 285 genera and 406 species. Ascomycetes was the dominant phylum with a relative abundance of 2.53%–96.86%. followed by Basidiomycetes with a relative abundance of 0.02%–9.39%. The dominant genera included Beauveria, Ophiosphaerella, Aspergillus, Gibberella, Alternaria, Phaeosphaeria, Nigrospora, Microdochium and Candida. The dominant species included B. bassiana, O. agrostidis, A. flavus, A. ochraceus, A. niger, G. intricans, A. longissima, P. microscopica and N. oryzae. Through Venn diagram analysis and principal component analysis (PCA), it was found that there were significant differences in the fungal community diversity between fresh and stored rice samples, and between stored rice samples. There were also differences in the fungal community diversity of rice samples under different temperature and humidity conditions. Conclusion: Relative humidity was the most important factor affecting the relative abundance of A. flavus with the maximum value being observed at 85% relative humidity. To sum up, this study provides theoretical support for the optimization of safe storage conditions for rice.

Key words: high-throughput sequencing; rice; simulated storage; microbial community structure; dominant fungal genera

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