食品科学 ›› 2022, Vol. 43 ›› Issue (12): 153-155.doi: 10.7506/spkx1002-6630-20210626-305

• 生物工程 • 上一篇    

基于RNA-seq分析酒酒球菌SD-2a酸胁迫应答机制

刘龙祥,彭帅,赵红玉,袁林,李华,,王华   

  1. (1.滨州学院生物与环境工程学院,山东省黄河三角洲野生植物资源工程技术研究中心,山东 滨州 256600;2.西北农林科技大学葡萄酒学院,陕西 杨凌 712100;3.陕西省葡萄与葡萄酒工程技术研究中心,陕西 杨凌 712100;4.西北农林科技大学合阳葡萄示范站,陕西 渭南 715300)
  • 发布日期:2022-07-01
  • 基金资助:
    国家自然科学基金青年科学基金项目(32001659);山东省自然科学基金青年项目(ZR2020QC224); 国家自然科学基金面上项目(31471708);山东省高等学校青创科技支持计划项目(2020KJD005)

Acid Stress Response Mechanism in Oenococcus oeni SD-2a Analyzed by RNA Sequencing

LIU Longxiang, PENG Shuai, ZHAO Hongyu, YUAN Lin, LI Hua,, WANG Hua   

  1. (1. Shandong Provincial Engineering and Technology Research Center for Wild Plant Resources Development and Application of Yellow River Delta, College of Biological and Environmental Engineering, Binzhou University, Binzhou 256600, China; 2. College of Enology, Northwest A&F University, Yangling 712100, China;3. Shaanxi Engineering Research Center for Viti-Viniculture, Yangling 712100, China;4. Heyang Experimental and Demonstrational Stations for Grape, Northwest A&F University, Weinan 715300, China)
  • Published:2022-07-01

摘要: 通过RNA-seq检测酒酒球菌SD-2a对短期酸胁迫(3 h)的反应,利用基因本体论和京都基因与基因组百科全书数据库分析不同处理间的转录组数据。此外,还测定了一些与应激反应相关的生理指标。在此基础上,绘制胁迫响应机理示意图。在酸性胁迫条件下,菌株合成更多的ATP,将H+泵出细胞,SD-2a的ATPase活性显著升高,适宜pH值可以维持适宜的酶反应环境进行生命活动。通过调节总不饱和脂肪酸和总环脂肪酸的含量,降低细胞膜的流动性。综上所述,胞内能量生产显著增加,一些有利于抗酸胁迫的耗能反应显著增加,而一些不相关的耗能反应受到抑制。此外,为了应对酸胁迫造成的损伤,DNA修复基因和伴侣蛋白基因的表达水平大大提高。本研究结果为酒酒球菌中与酸应激反应相关的调控网络提供了一定参考。

关键词: 酒酒球菌;转录组学;转录组测序技术;酸胁迫;苹果酸乳酸发酵

Abstract: The response of Oenococcus oeni SD-2a to short-term acid stress (3 h) was detected by?RNA sequencing (RNA-seq). The transcriptome data were analyzed using Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database. Besides, some physiological indicators related to the stress response were also measured. Based on the obtained results, a schematic diagram illustrating the stress response mechanism was drawn. It turned out that under acid stress condition, the bacterial cells synthesized more ATP to pump H+ out of them, and the ATPase activity was significantly increased. A suitable pH could maintain an appropriate enzymatic reaction environment for life activities. The cell membrane fluidity was decreased by adjusting the contents of total unsaturated fatty acids and total cyclic fatty acids. In conclusion, the intracellular energy production was greatly increased, and some energy dissipation responses favorable for resistance to acid stress were significantly increased, while some unrelated energy dissipation responses were inhibited. Furthermore, in order to deal with the damage caused by acid stress, the expression levels of DNA-repairing genes and chaperone protein genes were greatly increased. Our findings provide insights into the regulatory network associated with acid stress responses in O. oeni.

Key words: Oenococcus oeni; transcriptomics; RNA sequencing; acid shock; malolactic fermentation

中图分类号: