食品科学 ›› 2021, Vol. 42 ›› Issue (24): 67-73.doi: 10.7506/spkx1002-6630-20201015-134

• 生物工程 • 上一篇    

抗呋喃唑酮代谢物单链抗体基因构建及蛋白结构分析和活性鉴定

陈薪竹,王玉波,王丹,洪艳平,杜华英,戴棚,邓炜杰,熊建华,杨武英   

  1. (江西农业大学食品科学与工程学院,南昌市农产品加工与质量控制重点实验室,江西 南昌 330045)
  • 发布日期:2021-12-30
  • 基金资助:
    国家自然科学基金地区科学基金项目(31660486);江西省自然科学基金面上项目(20202BABL205021); 江西省教育厅科学技术研究项目(GJJ190218);江西省研究生创新专项(YC2020-S240); 江西省大宗淡水鱼产业技术体系项目(JXARS-3)

Gene Construction, Protein Structure Analysis and Activity Evaluation of Single-Chain Variable Fragment against 3-Amino-2-oxazolidinone Derivatives

CHEN Xinzhu, WANG Yubo, WANG Dan, HONG Yanping, DU Huaying, DAI Peng, DENG Weijie, XIONG Jianhua, YANG Wuying   

  1. (Key Laboratory of Agricultural Products Processing and Quality Control of Nanchang City, College of Food Science and Engineering, Jiangxi Agricultural University, Nanchang 330045, China)
  • Published:2021-12-30

摘要: 从单克隆杂交瘤细胞出发,构建抗3-氨基-2-噁唑烷酮(3-amino-2-oxazolidinone,AOZ)衍生物单链抗体基因,并对其蛋白质进行理化性质分析及结构预测和活性鉴定。首先以呋喃唑酮代谢物AOZ衍生物单克隆抗体杂交瘤细胞1D2为原料,提取总RNA后克隆重链(VH)、轻链(VL)可变区基因,然后使用重叠延伸聚合酶链式反应技术用连接肽(G4S)3将VH、VL基因连接构建抗AOZ衍生物单链抗体基因,经测序后采用生物信息软件对抗体编码的氨基酸序列进行推导并展开生物信息学分析,再将此基因与Plip6/GN表达载体连接后进行表达并采用直接竞争酶联免疫分析法(direct competitive enzyme-linked immunosorbent assay,dcELISA)鉴定其活性。结果表明:抗AOZ衍生物单链抗体基因全长750?bp,编码250?个氨基酸,相对分子质量为27?012.20,理论等电点为9.13,属于碱性氨基酸;其二级结构预测结果显示抗体蛋白含20?处α-螺旋、25?处β-转角、114?处无规卷曲、91?处延伸带结构;三级结构预测的正面俯视图显示重、轻链由连接肽相连形成一个“环桶状”结构,侧面显示为“口袋状”,这与常规单链抗体的结构特征一致,dcELISA结果也显示该抗体具有良好的抗原结合活性。本研究为后续AOZ残留检测免疫分析方法的建立及抗AOZ衍生物单链抗体的改造奠定一定基础。

关键词: 呋喃唑酮;3-氨基-2-噁唑烷酮;单链抗体;结构预测和活性鉴定

Abstract: The gene of single-chain variable fragment (scFv) against 3-amino-2-oxazolidinone (AOZ) derivatives was constructed and physicochemical properties and structure of its encoded protein were predicted in this study. First, total RNA was extracted from hybridoma cell line 1D2 that can secrete a monoclonal antibody (mAb) with high activity and specificity against AOZ derivatives and the heavy and light chain variable region encoding genes (VH and VL) were amplified and connected with each other via a (G4S)3 peptide linker by gene splicing overlap extension-polymerase chain reaction (SOE-PCR) to construct the scFv gene against AOZ derivatives. Then the sequence of amino acids in the antibody was deduced and bioinformatic analysis was carried out after gene sequencing. Finally, the scFv gene was inserted into the expression vector Plip6/GN for expression and the activity of the expressed protein was identified by direct competitive enzyme-linked immunosorbent assay (dcELISA). The results showed that the full length of the scFv gene was 750 bp, encoding a protein of 250 amino acids with a molecular mass of 27 012.20 and a theoretical pI of 9.13. The predicted secondary structure showed that the antibody contained 20 α-helixes, 25 β-turns, 114 random coli and 91 extension bands. The front top view of the tertiary structure prediction showed that the heavy and light chains were connected with each other by linkers to form a circular bucket-like structure, and the side view showed a pocket-like structure, which was consistent with the structural characteristics of natural scFv. The dcELISA results showed that the antibody had good antigen-binding activity. This study will lay a foundation for the establishment of immunoassay methods for AOZ residue detection and the modification of scFv against AOZ derivatives in the future.

Key words: furazolidone; 3-amino-2-oxazolidinone; single chain variable fragment; structure prediction and activity evaluation

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