食品科学 ›› 2018, Vol. 39 ›› Issue (18): 179-185.doi: 10.7506/spkx1002-6630-201818028

• 生物工程 • 上一篇    下一篇

基于定向进化技术提高巨大芽孢杆菌谷氨酸脱羧酶活性

赵云飞,邵泽香,陆兆新,别小妹,赵海珍,张充,吕凤霞*   

  1. (南京农业大学食品科学技术学院,江苏?南京 210095)
  • 收稿日期:2018-10-09 修回日期:2018-10-09 出版日期:2018-09-25 发布日期:2018-09-18

Improve Glutamate Decarboxylase Activity from Bacillus megaterium by Directed Evolution

ZHAO Yunfei, SHAO Zexiang, LU Zhaoxin, BIE Xiaomei, ZHAO Haizhen, ZHANG Chong, Lü Fengxia*   

  1. (College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095, China)
  • Received:2018-10-09 Revised:2018-10-09 Online:2018-09-25 Published:2018-09-18

摘要: 为提高巨大芽孢杆菌谷氨酸脱羧酶活性,通过定向进化技术对其进行酶工程改造。经过二轮易错聚合酶链式反应,从13 000 多个突变株中筛选到突变株A5-3、E2-4、E3-11,相对于野生型,其酶比活力提高了157%、115%、97%,且Kcat/Km都有所增大。其中A5-3氨基酸序列发生了2 个突变(A55D和D451E)。三维模拟结果表明,第55位丙氨酸突变为天冬氨酸很可能为酶促反应提供H+,从而加快酶促反应效率;突变株E2-4第34位由亮氨酸突变成谷氨酰胺,一定程度上改善了酶的热稳定性;突变株E3-11的第325位由丙氨酸突变成丝氨酸有利于蛋白内部形成更多氢键,增大了该部位的柔性,更有利于氨基酸残基之间发生相互作用。圆二色谱分析表明,突变株与野生型具有相似的三维结构,相比于野生酶,突变酶的α-螺旋减少,无规则卷曲增加,说明突变酶刚性有所下降而柔性增加。利用定向进化技术可以明显改善谷氨酸脱羧酶的酶活性,为其工业化的应用提供实验参考。

关键词: 谷氨酸脱羧酶, 定向进化, 酶活性

Abstract: In order to improve the activity of glutamate decarboxylase (GAD) of Bacillus megaterium, its encoding gene was molecularly modified by directed evolution. Mutants A5-3, E2-4 and E3-11 were screened out from more than 13 000 mutants by two rounds of error-prone PCR, whose specific activities were increased respectively by 157%, 115% and 97% and whose Kcat/Km ratio was also increased compared to the wild-type strain. The amino acid sequence of A5-3 showed two mutations, A55D and D451E. From the results of 3-dimensional simulations, the alanine to aspartate mutation at position 55 may provide H+ to the enzymatic reaction, thereby accelerating the reaction rate. In mutant E2-4, the leucine to glutamine mutation at position 34 may improve the thermal stability of the enzyme. As for mutant E3-11, the mutation of alanine 325 to serine was conducive to the formation of more hydrogen bonds inside the protein, increasing the flexibility of the site and facilitating the interaction between amino acid residues. The circular dichroism analysis showed that the mutants had similar three-dimensional structure to the wild-type strain. Compared to the wild-type enzyme, the mutant enzymes contained less α-helix but more random coil, indicating a slight decrease in rigidity and an increase in flexibility. This study indicates that directional evolution can effectively improve the glutamate decarboxylase activity of B. megaterium, which will lay the foundation for its industrial application.

Key words: glutamate decarboxylase, directed evolution, enzyme activity

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