食品科学 ›› 2019, Vol. 40 ›› Issue (8): 33-40.doi: 10.7506/spkx1002-6630-20180504-043

• 生物工程 • 上一篇    下一篇

应用Illumina MiSeq测序技术比较风干肉中细菌多样性和微生物安全性

田建军,张开屏,杨明阳,景智波,李权威,赵丽华,靳 烨   

  1. 1.内蒙古农业大学食品科学与工程学院,内蒙古 呼和浩特 010018;2.内蒙古商贸职业学院食品工程系,内蒙古 呼和浩特 010070
  • 出版日期:2019-04-25 发布日期:2019-05-05
  • 基金资助:
    国家自然科学基金地区科学基金项目(31660439);“十三五”国家重点研发计划重点专项(2016YFE0106200);内蒙古自治区科技计划项目(201701008发酵肉制品安全生产关键技术和产业化开发);内蒙古自治区自然科学基金面上项目(2016MS0311;2017MS0363);内蒙古自治区高等学校科学研究项目(NJZY17445)

Comparative Bacterial Diversity Analysis and Microbial Safety Assessment of Air-Dried Meat Products by Illumina MiSeq Sequencing Technology

TIAN Jianjun, ZHANG Kaiping, YANG Mingyang, JING Zhibo, LI Quanwei, ZHAO Lihua, JIN Ye   

  1. 1. College of Food Science and Engineering, Inner Mongolia Agricultural University, Hohhot 010018, China; 2. Department of Food Engineering, Inner Mongolia Business Vocational College, Hohhot 010070, China
  • Online:2019-04-25 Published:2019-05-05

摘要: 为了解风干肉制品中细菌的多样性及其微生物的安全性,采用Illumina MiSeq高通量测序技术,分析风干肉制品中细菌16S rRNA V4区基因序列,进而比较不同风干肉微生物的群落结构组成及多样性差异。结果显示,14 个样品共获得466 975 条有效序列,975 个操作分类单元。多样性分析表明,自然发酵风干肉中具有高度的微生物群落多样性。微生物群落组成分析表明,自然发酵样品中厚壁菌门(Firmicutes,39%)、变形菌门(Proteobacteria,40%)、拟杆菌门(Bacteroidetes,14%)为优势菌门,所占比例都超过了10%,人工调控样品中Firmicutes(92%)为优势菌门。在自然发酵和人工调控肉制品中分别鉴定出241 个和102 个细菌属,细菌多样性在属的水平上差异显著(P<0.05)。研究结果加深了对风干肉细菌群落组成和多样性的认识,为保证风干肉制品的质量安全、提高风干肉制品的品质、优化风干肉的生产工艺提供理论依据。

关键词: 发酵肉制品, 传统细菌群落结构, 微生物安全性评价, 高通量测序

Abstract: In order to understand the bacterial diversity and microbial safety of air-dried meat products, we sequenced the V4 region of the bacterial 16S rRNA gene from air-dried meat products by using Illumina MiSeq sequencing and evaluated the variability of the bacterial community structure and diversity. A total of 466 975 valid sequences and 975 operational taxonomic units (OTUs) were obtained for 14 samples. Air-dried naturally fermented meat products showed high microbial diversity. The analysis of bacterial community composition indicated that Firmicutes (39%), Proteobacteria (40%) and Bacteroidetes (14%) were the dominant bacteria in naturally fermented meat products, while Firmicutes (92%) were the dominant bacteria in samples fermented under controlled conditions. A total of 241 and 102 bacterial genera were identified in naturally and artificially fermented meat products, respectively, and the bacterial diversity was significantly different at the genera level (P < 0.05). The results from this research provide a theoretical basis for ensuring the quality and safety and optimizing the manufacturing process of air-dried meat products.

Key words: fermented meat products, autochthonous bacterial community structure, microbial safety assessment, highthroughput sequencing

中图分类号: