食品科学 ›› 2020, Vol. 41 ›› Issue (24): 78-86.doi: 10.7506/spkx1002-6630-20191022-228

• 生物工程 • 上一篇    下一篇

高通量测序分析赤水晒醋各生产阶段微生物群落结构变化

李荣源,卢红梅,秦兴,陈莉,汪沙,吴震   

  1. (贵州大学 贵州省发酵工程与生物制药重点实验室,酿酒与食品工程学院,贵州 贵阳 550025)
  • 出版日期:2020-12-25 发布日期:2020-12-28
  • 基金资助:
    贵州省农业攻关计划项目(黔科合支撑[2016]2540号)

High-throughput Sequencing Study on Changes in Microbial Community Structure in Different Production Stages of Chishui Sun-Dried Vinegar

LI Rongyuan, LU Hongmei, QIN Xing, CHEN Li, WANG Sha, WU Zhen   

  1. (Guizhou Key Laboratory of Fermentation Engineering and Biopharmacy, School of Liquor and Food Engineering, Guizhou University, Guiyang 550025, China)
  • Online:2020-12-25 Published:2020-12-28

摘要: 以赤水晒醋生产过程中药曲、乙醇发酵、醋酸发酵和醋醅曝晒样品为研究对象,采用高通量测序检测微生物群落结构及丰度。结果表明,本实验测序深度有效地覆盖其微生物种类,药曲的优势细菌菌属为芽孢杆菌属(Bacillus)、链霉菌属(Streptomyces)和高温放线菌属(Thermoactinomyces),真菌菌属为曲霉属(Aspergillus)、嗜热真菌属(Thermomyces);乙醇发酵的优势细菌菌属为乳杆菌属(Lactobacillus),真菌菌属为Aspergillus、Thermomyces;醋酸发酵的优势细菌菌属为Lactobacillus和醋酸菌(Acetobacter),真菌菌属为Aspergillus、丝孢酵母菌属(Trichosporon);醋醅曝晒阶段微生物种类最多,相对丰度均匀,无绝对优势菌属,相对丰度较高的细菌菌属有Bacillus、Thermoactinomyces、变形杆菌菌属(Proteus)、葡糖醋杆菌属(Gluconacetobacter)和红球菌属(Rhodococcus),真菌菌属为Aspergillus、枝孢属(Cladosporium)、梗孢酵母属(Sterigmatomyces)、枝顶孢属(Acremonium)和链格孢属(Alternaria)。通过丰度聚类热图分析和β多样性表明:同一批药曲、乙醇和醋酸发酵各样品间相似性较高,而醋醅曝晒样品间有明显差异,这可能与含盐和缺氧有关;乙醇和醋酸发酵阶段样品的相似性较高,与另2 个阶段有明显差异,说明这2 个阶段的微生物因环境相似而存在延续性。

关键词: 赤水晒醋;微生物群落结构;高通量测序

Abstract: The structure and abundance of the microbial community in samples collected from different production stages of Chishui sun-dried vinegar including herbal Qu, alcoholic fermentation, acetic acid fermentation and sun-dried fermented grains were detected by high-throughput sequencing. The results showed that the sequencing depth effectively covered all microbial species in the samples. The dominant bacterial genera of herbal Qu were Bacillus, Streptomyces and Thermoactinomyces, and the dominant fungal genera were Aspergillus and Thermomyces. During alcoholic fermentation, the dominant bacterial genus was Lactobacillus and the dominant fungal genera were Aspergillus and Thermomyces. The dominant bacterial genera were Lactobacillus and Acetobacter, and the dominant fungal genera were Aspergillus and Trichosporon during acetic acid fermentation. Sun-dried fermented grains had the greatest number of microbial species with uniform relative abundance distribution, and there were no absolutely dominant bacteria and fungi in this stage. The relative abundances of Bacillus, Thermoactinomyces, Proteus, Gluconacetobacter and Rhodococcus were higher than those of other bacterial genera identified, and the relative abundances of Aspergillus, Cladosporium, Sterigmatomyces, Acremonium and Alternaria were higher than those of other fungal genera identified. Clustering heat map analysis and β diversity showed that the microbial community structure in the first three stages basically did not change, while that in the last one significantly varied among samples from the same batch, which may related to the presence of salt and lack of oxygen in the jar. The microbial community structure in the stages of alcoholic fermentation and acetic fermentation was similar to each other, but was significantly different from that in the other two stages, indicating that the microbial community structure in the former these two stages is continuous due to environmental similarity.

Key words: Chishui sun-dried vinegar; microbial community structure; high-throughput sequencing

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