食品科学 ›› 2022, Vol. 43 ›› Issue (3): 286-295.doi: 10.7506/spkx1002-6630-20201113-145

• 专题论述 • 上一篇    下一篇

微生物组技术在果蔬采后领域中的研究进展

张鸿雁,雷兴梦,荆佳伊,邓丽莉,易兰花,曾凯芳   

  1. (1.西南大学食品科学学院,重庆 400715;2.西南大学食品贮藏与物流研究中心,重庆 400715)
  • 出版日期:2022-02-15 发布日期:2022-03-08
  • 基金资助:
    “十三五”国家重点研发计划重点专项(2019YFD1002300); 重庆市技术创新与应用发展专项重点项目(cstc2019jscx-dxwtBX0027)

Progress in the Application of Microbiome Technology in the Field of Postharvest Fruits and Vegetables

ZHANG Hongyan, LEI Xingmeng, JING Jiayi, DENG Lili, YI Lanhua, ZENG Kaifang   

  1. (1. College of Food Science, Southwest University, Chongqing 400715, China; 2. Research Center of Food Storage & Logistics, Southwest University, Chongqing 400715, China)
  • Online:2022-02-15 Published:2022-03-08

摘要: 测序技术使研究不可培养微生物成为可能,该方法不仅可以获得研究对象的物种组成信息,还可以进一步研究功能基因层面的信息;常用的测序方法包括扩增子测序和宏基因组测序。采后水果和蔬菜中掩藏了大量微生物,但大多数与农产品相关的微生物研究都集中在少数几种病原菌或者单一的拮抗菌上,因而对果蔬中发现的微生物群落的多样性及其结构、影响因素知之甚少。由此,本文将对通过测序来评估果蔬上微生物群落结构的一些研究进行总结,并介绍了微生物组相关定义和主要测序方法;分析了微生物组测序技术在采后果蔬中的应用及相关研究进展;且在此基础上进一步总结目前微生物组技术在采后果蔬领域应用的限制因素,提出一些可能的研究方向,为采后果蔬微生物组的研究提供一定的理论依据。

关键词: 微生物组;分析流程;果蔬采后;合成群落;病害防治

Abstract: Sequencing technologies make it possible to explore uncultured microorganisms since they can be used to obtain the species composition information of research objects and further study the information at the functional gene level. The commonly used sequencing methods include amplicon sequencing and metagenomic sequencing. Postharvest fruits and vegetables harbor a large number of microorganisms. But most current studies on microorganisms on agricultural products focus only on a few pathogens or a single antagonist, so that little is known about the diversity and composition of microbial communities on agricultural products and the factors that influence their structures. Therefore, this review summarizes recent studies evaluating the microbial community structure on agricultural products by sequencing, describes the definition of microbiome and related terms and the major sequencing methods, and discusses recent progress in the application of microbiom sequencing technologies in postharvest fruits and vegetables. Furthermore, it discusses the factors limiting the application of microbiom technology in the field of postharvest fruits and vegetables and puts forward some possible future research directions. Hopefully, this review will provide a theoretical basis for future studies on the microbiome of fruits and vegetables after harvest.

Key words: microbiome; analysis process; postharvest fruits and vegetables; synthetic community; disease prevention

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