食品科学 ›› 2019, Vol. 40 ›› Issue (16): 130-136.doi: 10.7506/spkx1002-6630-20180718-229

• 生物工程 • 上一篇    下一篇

基于培养基法和高通量测序法分析冷藏小龙虾优势腐败菌

江杨阳,杨水兵,余海霞,姚洁玉,胡亚芹   

  1. 1.浙江大学生物系统工程与食品科学学院,馥莉食品研究院,智能食品加工技术与装备国家(地方)联合实验室,农业部农产品产后处理重点实验室,农业部农产品营养功能评价实验室,浙江省农产品加工技术研究重点实验室,浙江 杭州 310058;2.浙江大学舟山海洋研究中心,浙江 舟山 316021
  • 出版日期:2019-08-25 发布日期:2019-08-26
  • 基金资助:
    “十三五”国家重点研发计划重点专项(2017YFD0400404)

Analysis of Specific Spoilage Organisms in Chilled Red Swamp Crayfish Using Culture-Dependent Method and High-Throughput Sequencing

JIANG Yangyang, YANG Shuibing, YU Haixia, YAO Jieyu, HU Yaqin   

  1. 1. National Engineering Laboratory of Intelligent Food Technology and Equipment, Key Laboratory for Agro-Products Postharvest Handling, Ministry of Agriculture, Key Laboratory for Agro-Products Nutritional Evaluation, Ministry of Agriculture, Zhejiang Key Laboratory for Agro-Food Processing, Fuli Institute of Food Science, College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, China; 2. Ocean Research Center of Zhoushan, Zhejiang University, Zhoushan 316021, China
  • Online:2019-08-25 Published:2019-08-26

摘要: 为揭示4 ℃冷藏小龙虾贮藏期间微生物菌群多样性及优势腐败菌种类,以传统培养基法作为对照,采用高通量测序技术分别鉴定小龙虾样品在鲜样期、腐败中期、腐败末期的腐败菌属,探究贮藏期间微生物菌群变化趋势。2 种测序方法对比发现,高通量法检测到的菌属更具多样性,培养基法提取的腐败菌均包含在高通量测序菌属内。结果表明,培养基法提取优势腐败菌共11 株,其中气单胞菌(Aeromonas jandaei)致腐能力最强,弗氏柠檬酸杆菌(Citrobacter freundii)致腐能力最弱;此外,高通量测序法显示希瓦氏菌(Shewanella sp.)、肉杆菌属(Carnobacterium sp.)、环丝菌属(Brochothrix sp.)、嗜冷菌属(Psychrobacter sp.)、漫游球菌属(Vagococcus sp.)、不动杆菌属(Acinetobacter sp.)等在腐败末期时的物种丰度为90.57%。2 种方法比对可以确定,小龙虾的优势腐败菌有希瓦氏菌、肉食杆菌、环丝菌属、嗜冷菌属、漫游球菌属、不动杆菌属、气单胞菌、束毛球菌属(Trichococcus sp.)等。

关键词: 小龙虾, 优势腐败菌, 培养基法, 高通量测序

Abstract: In order to reveal the microbial diversity and specific spoilage organisms (SSOs) of red swamp crayfish under refrigerated condition (4 ℃), we individually isolated the SSOs using the culture-dependent method in this study and evaluated their spoilage abilities. Meanwhile, high-throughput sequencing technology was used to identify the spoilage bacterial species in fresh crayfish and those at the middle and late stages of spoilage and to explore the changes in the microbial community during refrigerated storage. The results showed that a higher bacterial diversity was detected by highthroughput sequencing compared to the culture-dependent method and the former method identified more genera than the latter. A total of 11 strains of SSOs were detected by the culture-dependent method, among which Aeromonas jandaei had the strongest spoilage ability while Citrobacter freundii had the weakest spoilage ability. In addition, high-throughput sequencing revealed that the total relative abundance of Shewanella sp., Carnobacterium sp., Brochothrix sp., Psychrobacter sp., Vagococcus sp. and Acinetobacter sp. was 90.57% at the end of shelf life. By comparing the results of the two methods, it was found that the SSOs in chilled crayfish mainly included Shewanella sp., Carnobacterium sp., Brochothrix sp., Psychrobacter sp., Vagococcus sp., Acinetobacter sp., Aeromonas jandaei, and Trichococcus sp..

Key words: red swamp crayfish, specific spoilage organism, culture-dependent method, high-throughput sequencing

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