食品科学 ›› 2023, Vol. 44 ›› Issue (18): 133-140.doi: 10.7506/spkx1002-6630-20221024-252

• 生物工程 • 上一篇    

基于宏基因组技术分析自然发酵羊肉香肠中微生物多样性及生物胺的代谢

吴双慧,牛茵,何济坤,刀筱芳,唐俊妮,陈娟   

  1. (西南民族大学食品科学与技术学院,四川 成都 610041)
  • 发布日期:2023-09-29
  • 基金资助:
    四川省自然科学基金面上项目(2022NSFSC0118);西南民族大学研究生创新型科研项目(ZD2022394)

Metagenomic Analysis of Microbial Diversity and Biogenic Amine Metabolism in Naturally Fermented Mutton Sausage

WU Shuanghui, NIU Yin, HE Jikun, DAO Xiaofang, TANG Junni, CHEN Juan   

  1. (College of Food Sciences and Technology, Southwest Minzu University, Chengdu 610041, China)
  • Published:2023-09-29

摘要: 以不同发酵阶段的羊肉香肠为研究对象,分别采用高效液相色谱法和宏基因组技术测定发酵过程中生物胺含量变化和微生物群落演替,对生物胺和微生物多样性进行相关性分析,并结合非冗余蛋白质序列、直系同源蛋白分组比对数据库和京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)数据库对微生物和酶的丰度与功能进行注释。结果发现,羊肉香肠样品中生物胺随着发酵时间的延长呈现先增加后降低的趋势,在8 种生物胺中,精胺含量最高。羊肉香肠样品中共鉴定出43 个门、60 个纲、112 个目、201 个科、465 个属和2 156 个种的微生物,细菌中的葡萄球菌属、弧菌属、酒球菌属和嗜血杆菌属为优势菌属。Spearman相关性分析显示,色胺、尸胺、酪胺、亚精胺和精胺与相对丰度前30的某些细菌属有显著相关(P<0.05),组胺、腐胺和苯乙胺与这些细菌属不存在显著相关性。利用KEGG数据库分析样品宏基因组数据后,得到样品的生物胺代谢路径及关联的酶和微生物,发现样品中有合成和降解尸胺、腐胺、亚精胺和精胺的细菌,有降解色胺、苯乙胺和酪胺的细菌,没有代谢组胺的细菌。研究结果不仅阐明了生物胺与微生物菌群的相关性,还对生物胺代谢与微生物和酶的关系作了阐述。

关键词: 羊肉香肠;宏基因组;微生物多样性;生物胺代谢

Abstract: The changes in biogenic amine contents of naturally fermented mutton sausage samples during different fermentation stages were detected by high performance liquid chromatography (HPLC), and the microbial community succession was explored using metagenomics. Meanwhile, the correlation between biogenic amines and microbial diversity was established, and the abundance and functional annotation of microorganisms and enzymes were investigated by means of the Non-Redundant (NR) Protein Sequence database, evolutionary genealogy of genes: Non-supervised Orthologous Groups (eggNOG) database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database. The results showed that biogenic amine contents increased first and then decreased with fermentation time, and the content of spermine was the highest among eight tested biogenic amines. A total of 43 phyla, 60 classes, 112 orders, 201 families, 465 genera and 2 156 species of microorganisms were identified in fermented mutton sausage samples. Staphylococcus, Vibrio, Oenococcus and Haemophilus were the dominant bacteria. Spearman correlation analysis showed that the contents of tryptamine, cadaverine, tyramine, spermidine, and spermine were significantly (P < 0.05) related to some of the top 30 most abundant bacterial genera, while the contents of histamine, putrescine, and phenylethylamine were not. After analyzing the metagenomic data using the KEGG database, biogenic amine metabolic pathways and related enzymes and bacteria were found, including those that could metabolize cadaverine, putrescine, spermidine and spermine, those that could catabolize tryptamine, phenylethylamine and tyramine, but not those that could metabolize histamine. Apart from the correlation between biogenic amines and microbial flora, this study also clarified the relationship of biogenic amine metabolism with enzymes and microorganisms.

Key words: fermented mutton sausage; metagenome; microbial diversity; biogenic amine metabolism

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